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Artificial Life Likely in 3 to 10 Years

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PAK





Joined: 03 Feb 2006
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Artificial Life Likely in 3 to 10 Years PostWed Aug 22, 2007 5:47 pm  Reply with quote  

Since they are making this public, that means they have already created new forms of artificial life, debated it and made the decision to "recreate" the Earth in a scientific image.







This undated photo provided by ProtoLife Srl.of Venice, Italy, shows vesicles, artificial membranes for cells, made from scratch. Teams around the world, including ProtoLife, are trying to create synthetic life from scratch, and the first step many of them are working on is making a container for the life form such as these vesicles. The large cell container (with little ones inside of it), shown in computer-created coloring, is about the thickness of a human hair. (AP Photo/Protolife Srl., Martin Hanczyc)


(AP) -- Around the world, a handful of scientists are trying to create life from scratch and they're getting closer. Experts expect an announcement within three to 10 years from someone in the now little-known field of "wet artificial life."

"It's going to be a big deal and everybody's going to know about it," said Mark Bedau, chief operating officer of ProtoLife of Venice, Italy, one of those in the race. "We're talking about a technology that could change our world in pretty fundamental ways - in fact, in ways that are impossible to predict."

That first cell of synthetic life - made from the basic chemicals in DNA - may not seem like much to non-scientists. For one thing, you'll have to look in a microscope to see it.

"Creating protocells has the potential to shed new light on our place in the universe," Bedau said. "This will remove one of the few fundamental mysteries about creation in the universe and our role."

And several scientists believe man-made life forms will one day offer the potential for solving a variety of problems, from fighting diseases to locking up greenhouse gases to eating toxic waste.

Bedau figures there are three major hurdles to creating synthetic life:

- A container, or membrane, for the cell to keep bad molecules out, allow good ones, and the ability to multiply.

- A genetic system that controls the functions of the cell, enabling it to reproduce and mutate in response to environmental changes.

- A metabolism that extracts raw materials from the environment as food and then changes it into energy.

One of the leaders in the field, Jack Szostak at Harvard Medical School, predicts that within the next six months, scientists will report evidence that the first step - creating a cell membrane - is "not a big problem." Scientists are using fatty acids in that effort.

Szostak is also optimistic about the next step - getting nucleotides, the building blocks of DNA, to form a working genetic system.

His idea is that once the container is made, if scientists add nucleotides in the right proportions, then Darwinian evolution could simply take over.

"We aren't smart enough to design things, we just let evolution do the hard work and then we figure out what happened," Szostak said.

In Gainesville, Fla., Steve Benner, a biological chemist at the Foundation for Applied Molecular Evolution is attacking that problem by going outside of natural genetics. Normal DNA consists of four bases - adenine, cytosine, guanine and thymine (known as A,C,G,T) - molecules that spell out the genetic code in pairs. Benner is trying to add eight new bases to the genetic alphabet.

Bedau said there are legitimate worries about creating life that could "run amok," but there are ways of addressing it, and it will be a very long time before that is a problem.

"When these things are created, they're going to be so weak, it'll be a huge achievement if you can keep them alive for an hour in the lab," he said. "But them getting out and taking over, never in our imagination could this happen."

© 2006 The Associated Press. All rights reserved. This material may not be published, broadcast, rewritten or redistributed.

This news is brought to you by PhysOrg.com


http://www.physorg.com/news106808506.html


Discovery Channel Video

http://dsc.discovery.com/news/2007/08/20/artificiallife_tec.html

Here's the link to the company PROTOLIFE company - Scientists from Rockefeller University are involved - wow - what a coincidence. Browse their website, it's illuminating.

http://www.protolife.net/
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... we are in process of developing a whole series of techniques which will enable the controlling oligarchy who have always existed and presumably will always exist to get people to love their servitude. Aldous Huxley
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perverted_introvert





Joined: 06 Jun 2006
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Anti PostThu Aug 23, 2007 1:33 am  Reply with quote  

Interesting as always, thanks for the post.


quote:
Since they are making this public, that means they have already created new forms of artificial life, debated it and made the decision to "recreate" the Earth in a scientific image.


Wouldn't this make them some sort of Anti-God?
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PAK





Joined: 03 Feb 2006
Posts: 1324
PostThu Aug 23, 2007 1:49 am  Reply with quote  

Depends on what you determine is the definition of the word GOD.

http://www.m-w.com/dictionary/god+

Main Entry: 1god
Pronunciation: 'gäd also 'god
Function: noun
Etymology: Middle English, from Old English; akin to Old High German got god
1 capitalized : the supreme or ultimate reality: as a : the Being perfect in power, wisdom, and goodness who is worshipped as creator and ruler of the universe b Christian Science : the incorporeal divine Principle ruling over all as eternal Spirit : infinite Mind
2 : a being or object believed to have more than natural attributes and powers and to require human worship; specifically : one controlling a particular aspect or part of reality
3 : a person or thing of supreme value
4 : a powerful ruler


Pharoahs and Kings believed they were God incarnate on this Earth, so they owned everything, water, air, fire, land, humans, plants and animals. Their decendants today still believe they are Gods of this Earth, and in high noble freemasonry, they can control the outcome of this planet, they can create new life forms, kill off useless eaters, whatever they dream of. They do have all the money and science to do what they want, and they have our consent to do it, so far.
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... we are in process of developing a whole series of techniques which will enable the controlling oligarchy who have always existed and presumably will always exist to get people to love their servitude. Aldous Huxley
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jasy





Joined: 12 Jun 2007
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PostThu Aug 23, 2007 7:40 am  Reply with quote  

scary
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PAK





Joined: 03 Feb 2006
Posts: 1324
PostMon Dec 17, 2007 10:26 pm  Reply with quote  

IF THEY ARE TELLING US ABOUT IT THAT MEANS THEY'VE ALREADY HAD IT FOR AT LEAST 25 YEARS.

Synthetic DNA on the Brink of Yielding New Life Forms

By Rick Weiss
Washington Post Staff Writer
Monday, December 17, 2007; A01


It has been 50 years since scientists first created DNA in a test tube, stitching ordinary chemical ingredients together to make life's most extraordinary molecule. Until recently, however, even the most sophisticated laboratories could make only small snippets of DNA -- an extra gene or two to be inserted into corn plants, for example, to help the plants ward off insects or tolerate drought.

Now researchers are poised to cross a dramatic barrier: the creation of life forms driven by completely artificial DNA.

Scientists in Maryland have already built the world's first entirely handcrafted chromosome -- a large looping strand of DNA made from scratch in a laboratory, containing all the instructions a microbe needs to live and reproduce.

In the coming year, they hope to transplant it into a cell, where it is expected to "boot itself up," like software downloaded from the Internet, and cajole the waiting cell to do its bidding. And while the first synthetic chromosome is a plagiarized version of a natural one, others that code for life forms that have never existed before are already under construction.

The cobbling together of life from synthetic DNA, scientists and philosophers agree, will be a watershed event, blurring the line between biological and artificial -- and forcing a rethinking of what it means for a thing to be alive.

"This raises a range of big questions about what nature is and what it could be," said Paul Rabinow, an anthropologist at the University of California at Berkeley who studies science's effects on society. "Evolutionary processes are no longer seen as sacred or inviolable. People in labs are figuring them out so they can improve upon them for different purposes."

That unprecedented degree of control over creation raises more than philosophical questions, however. What kinds of organisms will scientists, terrorists and other creative individuals make? How will these self-replicating entities be contained? And who might end up owning the patent rights to the basic tools for synthesizing life?

Some experts are worried that a few maverick companies are already gaining monopoly control over the core "operating system" for artificial life and are poised to become the Microsofts of synthetic biology. That could stifle competition, they say, and place enormous power in a few people's hands.

"We're heading into an era where people will be writing DNA programs like the early days of computer programming, but who will own these programs?" asked Drew Endy, a scientist at the Massachusetts Institute of Technology.

At the core of synthetic biology's new ascendance are high-speed DNA synthesizers that can produce very long strands of genetic material from basic chemical building blocks: sugars, nitrogen-based compounds and phosphates.

Today a scientist can write a long genetic program on a computer just as a maestro might compose a musical score, then use a synthesizer to convert that digital code into actual DNA. Experiments with "natural" DNA indicate that when a faux chromosome gets plopped into a cell, it will be able to direct the destruction of the cell's old DNA and become its new "brain" -- telling the cell to start making a valuable chemical, for example, or a medicine or a toxin, or a bio-based gasoline substitute.

Unlike conventional biotechnology, in which scientists induce modest genetic changes in cells to make them serve industrial purposes, synthetic biology involves the large-scale rewriting of genetic codes to create metabolic machines with singular purposes.

"I see a cell as a chassis and power supply for the artificial systems we are putting together," said Tom Knight of MIT, who likes to compare the state of cell biology today to that of mechanical engineering in 1864. That is when the United States began to adopt standardized thread sizes for nuts and bolts, an advance that allowed the construction of complex devices from simple, interchangeable parts.

If biology is to morph into an engineering discipline, it is going to need similarly standardized parts, Knight said. So he and colleagues have started a collection of hundreds of interchangeable genetic components they call BioBricks, which students and others are already popping into cells like Lego pieces.

So far, synthetic biology is still semi-synthetic, involving single-cell organisms such as bacteria and yeast that have a blend of natural and synthetic DNA. The cells can reproduce, a defining trait of life. But in many cases that urge has been genetically suppressed, along with other "distracting" biological functions, to maximize productivity.

"Most cells go about life like we do, with the intention to make more of themselves after eating," said John Pierce, a vice president at DuPont in Wilmington, Del., a leader in the field. "But what we want them to do is make stuff we want."

J. Craig Venter, chief executive of Synthetic Genomics in Rockville, knows what he wants his cells to make: ethanol, hydrogen and other exotic fuels for vehicles, to fill a market that has been estimated to be worth $1 trillion.

In a big step toward that goal, Venter has now built the first fully artificial chromosome, a strand of DNA many times longer than anything made by others and laden with all the genetic components a microbe needs to get by.

Details of the process are under wraps until the work is published, probably early next year. But Venter has already shown that he can insert a "natural" chromosome into a cell and bring it to life. If a synthetic chromosome works the same way, as expected, the first living cells with fully artificial genomes could be growing in dishes by the end of 2008.

The plan is to mass-produce a plain genetic platform able to direct the basic functions of life, then attach custom-designed DNA modules that can compel cells to make synthetic fuels or other products.

It will be a challenge to cultivate fuel-spewing microbes, Venter acknowledged. Among other problems, he said, is that unless the fuel is constantly removed, "the bugs will basically pickle themselves."

But the hurdles are not insurmountable. LS9 Inc., a company in San Carlos, Calif., is already using E. coli bacteria that have been reprogrammed with synthetic DNA to produce a fuel alternative from a diet of corn syrup and sugar cane. So efficient are the bugs' synthetic metabolisms that LS9 predicts it will be able to sell the fuel for just $1.25 a gallon.

At a DuPont plant in Tennessee, other semi-synthetic bacteria are living on cornstarch and making the chemical 1,3 propanediol, or PDO. Millions of pounds of the stuff are being spun and woven into high-tech fabrics (DuPont's chief executive wears a pinstripe suit made of it), putting the bug-begotten chemical on track to become the first $1 billion biotech product that is not a pharmaceutical.

Engineers at DuPont studied blueprints of E. coli's metabolism and used synthetic DNA to help the bacteria make PDO far more efficiently than could have been done with ordinary genetic engineering.

"If you want to sell it at a dollar a gallon . . . you need every bit of efficiency you can muster," said DuPont's Pierce. "So we're running these bugs to their limits."

Yet another application is in medicine, where synthetic DNA is allowing bacteria and yeast to produce the malaria drug artemisinin far more efficiently than it is made in plants, its natural source.

Bugs such as these will seem quaint, scientists say, once fully synthetic organisms are brought on line to work 24/7 on a range of tasks, from industrial production to chemical cleanups. But the prospect of a flourishing synbio economy has many wondering who will own the valuable rights to that life.

In the past year, the U.S. Patent and Trademark Office has been flooded with aggressive synthetic-biology claims. Some of Venter's applications, in particular, "are breathtaking in their scope," said Knight. And with Venter's company openly hoping to develop "an operating system for biologically-based software," some fear it is seeking synthetic hegemony.

"We've asked our patent lawyers to be reasonable and not to be overreaching," Venter said. But competitors such as DuPont, he said, "have just blanketed the field with patent applications."

Safety concerns also loom large. Already a few scientists have made viruses from scratch. The pending ability to make bacteria -- which, unlike viruses, can live and reproduce in the environment outside of a living body -- raises new concerns about contamination, contagion and the potential for mischief.

"Ultimately synthetic biology means cheaper and widely accessible tools to build bioweapons, virulent pathogens and artificial organisms that could pose grave threats to people and the planet," concluded a recent report by the Ottawa-based ETC Group, one of dozens of advocacy groups that want a ban on releasing synthetic organisms pending wider societal debate and regulation.

"The danger is not just bio-terror but bio-error," the report says.

Many scientists say the threat has been overblown. Venter notes that his synthetic genomes are spiked with special genes that make the microbes dependent on a rare nutrient not available in nature. And Pierce, of DuPont, says the company's bugs are too spoiled to survive outdoors.

"They are designed to grow in a cosseted environment with very high food levels," Pierce said. "You throw this guy out on the ground, he just can't compete. He's toast."

"We've heard that before," said Jim Thomas, ETC Group's program manager, noting that genes engineered into crops have often found their way into other plants despite assurances to the contrary. "The fact is, you can build viruses, and soon bacteria, from downloaded instructions on the Internet," Thomas said. "Where's the governance and oversight?"

In fact, government controls on trade in dangerous microbes do not apply to the bits of DNA that can be used to create them. And while some industry groups have talked about policing the field themselves, the technology is quickly becoming so simple, experts say, that it will not be long before "bio hackers" working in garages will be downloading genetic programs and making them into novel life forms.

"The cat is out of the bag," said Jay Keasling, chief of synthetic biology at the University of California at Berkeley.

Andrew Light, an environmental ethicist at the University of Washington in Seattle, said synthetic biology poses a conundrum because of its double-edged ability to both wreak biological havoc and perhaps wean civilization from dirty 20th-century technologies and petroleum-based fuels.

"For the environmental community, I think this is going to be a really hard choice," Light said.

Depending on how people adjust to the idea of man-made life -- and on how useful the first products prove to be -- the field could go either way, Light said.

"It could be that synthetic biology is going to be like cellphones: so overwhelming and ubiquitous that no one notices it anymore. Or it could be like abortion -- the kind of deep disagreement that will not go away."

The question, if the abortion model holds, is which side of the synthetic biology debate will get to call itself "pro-life."
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